XENLA Genome
From Marcotte Lab
Genome browser
- XenBase - JGIv6
- NIMR, UK (Mike Gilchrist) - JGIv5(2011oct), JGIv6a(2012nov)
- NIG, Japan (Asao Fujiyama & Masanori Taira) - NIGv2
Genome version
Name | Release Date | Concat. Length (bp) | N50 (bp) | Scaffolds > 10kbp | Remarks |
---|---|---|---|---|---|
JGIv1 | 2009 | ||||
JGIv5 | 2009 Oct. | ||||
JGIv6 | 2010 | ||||
JGIv6a | 2010 oct | ||||
JGIv7a | 2012 Mar. | ||||
JGIv7b | 2012 May | ||||
NIGv1 | 2011 Nov | ||||
NIGv1ap | 2011 Nov | ||||
NIGv1m | 2011 Nov. | ||||
NIGv2 | 2012 | ||||
NIGv2c | 2012 |
Data Summary
Whole genome shotgun sequencing, JGI/UC Berkeley, USA
- Illumina mate-pair
Whole genome shotgun sequencing, NIG/U Tokyo, Japan
- Illumina mate-pair
Whole genome shotgun sequencing, UT Austin, USA
- SOLiD mate-pair